Gene: ATR0564G222 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0564G222
Transcript Identifier
ATR0564G222.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00010 : 7223745-7224806 : negative

Family

Gene family
HOM04M000366
(308 genes in 27 species)
specific family
Subfamily
ORTHO04M000266
(291 genes in 27 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00010.407
idevm_27.TU.AmTr_v1.0_scaffold00010.407.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00010.407
nameevm_27.model.AmTr_v1.0_scaffold00010.407
pacid31572645
tidevm_27.model.AmTr_v1.0_scaffold00010.407.v1.0

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0031347 IEAPLAZA Integrative Orthologyregulation of defense responseAT3G47620
GO:0031540 IEAPLAZA Integrative Orthologyregulation of anthocyanin biosynthetic processAT1G69690
GO:0010029 IEAPLAZA Integrative Orthologyregulation of seed germinationAT3G47620
GO:2000024 IEAPLAZA Tree-based Orthologyregulation of leaf developmentSolyc01g103780.2
GO:0048510 IEAPLAZA Tree-based Orthologyregulation of timing of transition from vegetative to reproductive phaseAT1G35560
GO:0010229 IEAPLAZA Integrative Orthologyinflorescence developmentAT3G47620
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT3G47620
GO:0009739 IEAPLAZA Integrative Orthologyresponse to gibberellinAT3G47620
GO:0007623 IEAPLAZA Integrative Orthologycircadian rhythmAT1G69690
GO:0043433 IEAPLAZA Tree-based Orthologynegative regulation of sequence-specific DNA binding transcription factor activityAT5G08330
GO:0042023 IEAPLAZA Integrative OrthologyDNA endoreduplicationAT1G69690
GO:0010252 IEAPLAZA Integrative Orthologyauxin homeostasisAT1G69690
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT3G47620
GO:0048467 IEAPLAZA Integrative Orthologygynoecium developmentAT1G69690
GO:0048364 IEAPLAZA Tree-based Orthologyroot developmentAT2G45680
GO:0009735 IEAPLAZA Integrative Orthologyresponse to cytokininAT3G47620
GO:0042752 IEAPLAZA Tree-based Orthologyregulation of circadian rhythmAT5G08330
GO:0009653 IEAPLAZA Tree-based Orthologyanatomical structure morphogenesisAT3G27010
GO:0008361 IEAPLAZA Tree-based Orthologyregulation of cell sizeAT2G45680
GO:1900056 IEAPLAZA Tree-based Orthologynegative regulation of leaf senescenceAT2G45680
GO:0008283 IEAPLAZA Integrative Orthologycell proliferationAT3G47620

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT3G47620
GO:0000987 IEAPLAZA Tree-based Orthologycore promoter proximal region sequence-specific DNA bindingAT3G27010
GO:0003700 IEAPLAZA Tree-based Orthologytranscription factor activity, sequence-specific DNA bindingAT5G08330
GO:0001047 IEAPLAZA Tree-based Orthologycore promoter bindingAT1G58100
GO:0043565 IEAPLAZA Tree-based Orthologysequence-specific DNA bindingAT3G27010
GO:0044212 IEAPLAZA Tree-based Orthologytranscription regulatory region DNA bindingAT1G58100

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT3G47620

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR005333Transcription factor, TCP
IPR017887Transcription factor TCP subgroup

Mapman id Description
15.5.19.RNA biosynthesis.transcriptional regulation.transcription factor (TCP)
No SignalP domains detected for this gene.