Gene: ATR0564G100 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0564G100
Transcript Identifier
ATR0564G100.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00010 : 211126-223179 : negative

Family

Gene family
HOM04M000258
(384 genes in 27 species)
specific family
Subfamily
ORTHO04M000364
(242 genes in 27 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00010.14
idevm_27.TU.AmTr_v1.0_scaffold00010.14.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00010.14
nameevm_27.model.AmTr_v1.0_scaffold00010.14
pacid31572847
tidevm_27.model.AmTr_v1.0_scaffold00010.14.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0006351 IEAInterProtranscription, DNA-templated
GO:0045893 IEAPLAZA Integrative Orthologypositive regulation of transcription, DNA-templatedAT5G06950
GO:0009909 IEAPLAZA Integrative Orthologyregulation of flower developmentAT1G68640
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT5G06950
GO:0009814 IEAPLAZA Integrative Orthologydefense response, incompatible interactionAT5G06960
GO:0009627 IEAPLAZA Integrative Orthologysystemic acquired resistanceAT3G12250
GO:0009410 IEAPLAZA Integrative Orthologyresponse to xenobiotic stimulusAT3G12250
GO:0009862 IEAPLAZA Integrative Orthologysystemic acquired resistance, salicylic acid mediated signaling pathwayAT5G06950
GO:0009863 IEAPLAZA Integrative Orthologysalicylic acid mediated signaling pathwayAT5G06960

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700 IEAInterProtranscription factor activity, sequence-specific DNA binding
GO:0043565 IEAInterProsequence-specific DNA binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT3G12250
GO:0003677 IEAPLAZA Integrative OrthologyDNA bindingAT5G06950
GO:0042802 IEAPLAZA Integrative Orthologyidentical protein bindingAT5G06960

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT5G06950
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT5G06950

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR004827Basic-leucine zipper domain
IPR025422Transcription factor TGA like domain

Mapman id Description
15.5.4.1.RNA biosynthesis.transcriptional regulation.bZIP transcription factor superfamily.transcription factor (bZIP)
15.5.4.7.1.RNA biosynthesis.transcriptional regulation.bZIP transcription factor superfamily.TGA transcription factor activity.transcription factor (TGA)
26.8.3.1.2.External stimuli response.pathogen.defense mechanisms.systemic acquired resistance (SAR).NPR1-interactive transcription factor (TGA)
No SignalP domains detected for this gene.