Gene: ATR0564G097 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0564G097
Transcript Identifier
ATR0564G097.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00010 : 6901958-6913468 : positive

Family

Gene family
HOM04M002900
(57 genes in 28 species)
specific family
Subfamily
ORTHO04M003583
(54 genes in 28 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00010.384
idevm_27.TU.AmTr_v1.0_scaffold00010.384.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00010.384
nameevm_27.model.AmTr_v1.0_scaffold00010.384
pacid31572829
tidevm_27.model.AmTr_v1.0_scaffold00010.384.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0048193 IEAInterProGolgi vesicle transport
GO:0006623 IEAPLAZA Integrative Orthologyprotein targeting to vacuoleAT3G47700
GO:0006888 IEAPLAZA Integrative OrthologyER to Golgi vesicle-mediated transportAT3G47700

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005783 IEAInterProendoplasmic reticulum
GO:0030134 IEAPLAZA Tree-based OrthologyCOPII-coated ER to Golgi transport vesicleAT1G08400
GO:0030142 IEAPLAZA Tree-based OrthologyCOPI-coated Golgi to ER transport vesicleAT1G08400
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT3G47700
GO:0042406 IEAPLAZA Integrative Orthologyextrinsic component of endoplasmic reticulum membraneAT3G47700

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR007528RINT-1/Tip20

Mapman id Description
22.6.4.1.Vesicle trafficking.target membrane tethering.DSL1 (Depends-on-SLY1) complex.component MAG2
No SignalP domains detected for this gene.