Gene: ATR0564G074 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0564G074
Transcript Identifier
ATR0564G074.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00010 : 5327067-5328257 : negative

Family

Gene family
HOM04M000124
(701 genes in 27 species)
specific family
Duplication type
Tandem duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00010.290
idevm_27.TU.AmTr_v1.0_scaffold00010.290.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00010.290
nameevm_27.model.AmTr_v1.0_scaffold00010.290
pacid31573076
tidevm_27.model.AmTr_v1.0_scaffold00010.290.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0009409 IEAPLAZA Integrative Orthologyresponse to coldAT1G61980

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003690 IEAInterProdouble-stranded DNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT1G61980
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT5G07900
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G61980

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR003690Transcription termination factor, mitochondrial/chloroplastic

Mapman id Description
15.6.2.2.RNA biosynthesis.organelle machinery.transcriptional regulation.transcription factor (mTERF)
No SignalP domains detected for this gene.