Gene: ATR0564G071 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0564G071
Transcript Identifier
ATR0564G071.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00010 : 3356854-3362832 : negative

Family

Gene family
HOM04M000965
(142 genes in 29 species)
specific family
Subfamily
ORTHO04M004553
(45 genes in 28 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00010.171
idevm_27.TU.AmTr_v1.0_scaffold00010.171.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00010.171
nameevm_27.model.AmTr_v1.0_scaffold00010.171
pacid31572685
tidevm_27.model.AmTr_v1.0_scaffold00010.171.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055114 IEAInterProoxidation-reduction process
GO:0006635 IEAInterProfatty acid beta-oxidation
GO:0006631 IEAInterProfatty acid metabolic process
GO:0008152 IEAInterPrometabolic process
GO:0001676 IEAPLAZA Integrative Orthologylong-chain fatty acid metabolic processAT5G65110

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016627 IEAInterProoxidoreductase activity, acting on the CH-CH group of donors
GO:0050660 IEAInterProflavin adenine dinucleotide binding
GO:0003997 IEAInterProacyl-CoA oxidase activity
GO:0071949 IEAInterProFAD binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005777 IEAInterProperoxisome

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR034171Peroxisomal acyl-coenzyme A oxidase
IPR013786Acyl-CoA dehydrogenase/oxidase, N-terminal
IPR002655Acyl-CoA oxidase, C-terminal
IPR009075Acyl-CoA dehydrogenase/oxidase C-terminal
IPR006091Acyl-CoA oxidase/dehydrogenase, central domain
IPR012258Acyl-CoA oxidase
IPR009100Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain

Mapman id Description
5.7.3.2.1.Lipid metabolism.lipid degradation.fatty acid degradation.core beta-oxidation.acyl CoA oxidase (ACX)
No SignalP domains detected for this gene.