Gene: ATR0559G197 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0559G197
Transcript Identifier
ATR0559G197.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00012 : 4419922-4437508 : positive

Family

Gene family
HOM04M001196
(120 genes in 29 species)
specific family
Subfamily
ORTHO04M001431
(97 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00012.164
idevm_27.TU.AmTr_v1.0_scaffold00012.164.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00012.164
nameevm_27.model.AmTr_v1.0_scaffold00012.164
pacid31553098
tidevm_27.model.AmTr_v1.0_scaffold00012.164.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008152 IEAInterPrometabolic process
GO:0006096 IEAInterProglycolytic process
GO:0010043 IEAPLAZA Integrative Orthologyresponse to zinc ionAT3G55440
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT3G55440
GO:0009611 IEAPLAZA Integrative Orthologyresponse to woundingAT3G55440
GO:0009751 IEAPLAZA Integrative Orthologyresponse to salicylic acidAT3G55440
GO:0009658 IEAPLAZA Integrative Orthologychloroplast organizationAT2G21170
GO:0009735 IEAPLAZA Integrative Orthologyresponse to cytokininAT3G55440
GO:0006642 IEAPLAZA Integrative Orthologytriglyceride mobilizationAT2G21170
GO:0032504 IEAPLAZA Integrative Orthologymulticellular organism reproductionAT2G21170
GO:0002237 IEAPLAZA Integrative Orthologyresponse to molecule of bacterial originAT3G55440
GO:0002238 IEAPLAZA Integrative Orthologyresponse to molecule of fungal originAT3G55440
GO:0044262 IEAPLAZA Integrative Orthologycellular carbohydrate metabolic processAT3G55440
GO:0046166 IEAPLAZA Integrative Orthologyglyceraldehyde-3-phosphate biosynthetic processAT2G21170
GO:0019563 IEAPLAZA Integrative Orthologyglycerol catabolic processAT2G21170
GO:0080022 IEAPLAZA Integrative Orthologyprimary root developmentAT2G21170
GO:0046686 IEAPLAZA Integrative Orthologyresponse to cadmium ionAT3G55440
GO:0042542 IEAPLAZA Integrative Orthologyresponse to hydrogen peroxideAT3G55440
GO:0042742 IEAPLAZA Integrative Orthologydefense response to bacteriumAT3G55440
GO:0009625 IEAPLAZA Integrative Orthologyresponse to insectAT3G55440
GO:0009624 IEAPLAZA Integrative Orthologyresponse to nematodeAT3G55440
GO:0012501 IEAPLAZA Integrative Orthologyprogrammed cell deathAT3G55440

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004807 IEAInterProtriose-phosphate isomerase activity
GO:0003824 IEAInterProcatalytic activity
GO:0005507 IEAPLAZA Integrative Orthologycopper ion bindingAT3G55440
GO:0004866 IEAPLAZA Integrative Orthologyendopeptidase inhibitor activityAT3G55440

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009570 IEAPLAZA Integrative Orthologychloroplast stromaAT2G21170
GO:0005774 IEAPLAZA Integrative Orthologyvacuolar membraneAT3G55440
GO:0005773 IEAPLAZA Integrative OrthologyvacuoleAT3G55440
GO:0009579 IEAPLAZA Integrative OrthologythylakoidAT2G21170
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT2G21170
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT3G55440
GO:0048046 IEAPLAZA Integrative OrthologyapoplastAT2G21170
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT2G21170
GO:0009941 IEAPLAZA Integrative Orthologychloroplast envelopeAT2G21170
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT3G55440
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT2G21170
GO:0005618 IEAPLAZA Integrative Orthologycell wallAT3G55440

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000652Triosephosphate isomerase
IPR013785Aldolase-type TIM barrel
IPR022896Triosephosphate isomerase, bacterial/eukaryotic
IPR020861Triosephosphate isomerase, active site

Mapman id Description
2.1.1.3.Cellular respiration.glycolysis.cytosolic glycolysis.triosephosphate isomerase
3.1.2.1.Carbohydrate metabolism.sucrose metabolism.biosynthesis.cytosolic triose-phosphate isomerase
No SignalP domains detected for this gene.