Gene: ATR0559G037 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0559G037
Transcript Identifier
ATR0559G037.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00012 : 4275316-4322540 : negative

Family

Gene family
HOM04M005547
(36 genes in 28 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00012.159
idevm_27.TU.AmTr_v1.0_scaffold00012.159.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00012.159
nameevm_27.model.AmTr_v1.0_scaffold00012.159
pacid31552979
tidevm_27.model.AmTr_v1.0_scaffold00012.159.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010930 IEAPLAZA Integrative Orthologynegative regulation of auxin mediated signaling pathwayAT2G45000

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0017056 IEAInterProstructural constituent of nuclear pore
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT2G45000

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005643 IEAInterPronuclear pore
GO:0005635 IEAPLAZA Integrative Orthologynuclear envelopeAT2G45000
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT2G45000
GO:0034399 IEAPLAZA Integrative Orthologynuclear peripheryAT2G45000

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR026010Nucleoporin NSP1/NUP62
IPR007758Nucleoporin, NSP1-like, C-terminal

Mapman id Description
23.5.1.1.6.2.Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).central subcomplex.nucleoporin (NUP62)
No SignalP domains detected for this gene.