Gene: ATR0320G031 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0320G031
Transcript Identifier
ATR0320G031.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00107 : 430944-478321 : positive

Family

Gene family
HOM04M003579
(48 genes in 28 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00107.18
idevm_27.TU.AmTr_v1.0_scaffold00107.18.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00107.18
nameevm_27.model.AmTr_v1.0_scaffold00107.18
pacid31572411
tidevm_27.model.AmTr_v1.0_scaffold00107.18.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006810 IEAInterProtransport

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005643 IEAInterPronuclear pore
GO:0005730 IEAPLAZA Integrative OrthologynucleolusAT2G41620
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT2G41620
GO:0005635 IEAPLAZA Integrative Orthologynuclear envelopeAT3G57350

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR011990Tetratricopeptide-like helical domain
IPR007231Nucleoporin interacting component Nup93/Nic96

Mapman id Description
23.5.1.1.3.1.Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).linker subcomplex.scaffold nucleoporin (NUP93)
No SignalP domains detected for this gene.