Gene: ATR0225G016 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0225G016
Transcript Identifier
ATR0225G016.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00169 : 146007-151007 : positive

Family

Gene family
HOM04M001001
(139 genes in 29 species)
specific family
Subfamily
ORTHO04M000874
(133 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00169.12
idevm_27.TU.AmTr_v1.0_scaffold00169.12.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00169.12
nameevm_27.model.AmTr_v1.0_scaffold00169.12
pacid31575197
tidevm_27.model.AmTr_v1.0_scaffold00169.12.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006396 IEAInterProRNA processing

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003723 IEAInterProRNA binding
GO:0003676 IEAInterPronucleic acid binding
GO:0003729 IEAPLAZA Tree-based OrthologymRNA bindingAT2G43970

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAInterPronucleus
GO:0030529 IEAInterProintracellular ribonucleoprotein complex

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR034878Plant La-related protein, RNA recognition motif
IPR011991Winged helix-turn-helix DNA-binding domain
IPR006630La-type HTH domain
IPR009818Ataxin-2, C-terminal
IPR002344Lupus La protein
IPR000504RNA recognition motif domain

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.