Gene: ATR0222G011 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0222G011
Transcript Identifier
ATR0222G011.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00168 : 537434-550644 : positive

Family

Gene family
HOM04M001932
(80 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00168.19
idevm_27.TU.AmTr_v1.0_scaffold00168.19.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00168.19
nameevm_27.model.AmTr_v1.0_scaffold00168.19
pacid31560623
tidevm_27.model.AmTr_v1.0_scaffold00168.19.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006099 IEAInterProtricarboxylic acid cycle
GO:0055114 IEAInterProoxidation-reduction process
GO:0008152 IEAInterPrometabolic process
GO:0046686 IEAPLAZA Integrative Orthologyresponse to cadmium ionAT5G65750

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004591 IEAInterProoxoglutarate dehydrogenase (succinyl-transferring) activity
GO:0030976 IEAInterProthiamine pyrophosphate binding
GO:0016624 IEAInterProoxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
GO:0050897 IEAPLAZA Integrative Orthologycobalt ion bindingAT5G65750
GO:0008270 IEAPLAZA Integrative Orthologyzinc ion bindingAT5G65750

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT5G65750

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR0116032-oxoglutarate dehydrogenase E1 component
IPR031717Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal
IPR0321062-oxoglutarate dehydrogenase E1 component, N-terminal domain
IPR001017Dehydrogenase, E1 component
IPR005475Transketolase-like, pyrimidine-binding domain
IPR029061Thiamin diphosphate-binding fold

Mapman id Description
2.3.4.1.Cellular respiration.tricarboxylic acid cycle.2-oxoglutarate dehydrogenase complex.component E1
No SignalP domains detected for this gene.