Gene: ATR0174G033 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0174G033
Transcript Identifier
ATR0174G033.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00153 : 873537-876114 : negative

Family

Gene family
HOM04M000121
(715 genes in 29 species)
specific family
Subfamily
ORTHO04M000163
(372 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00153.42
idevm_27.TU.AmTr_v1.0_scaffold00153.42.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00153.42
nameevm_27.model.AmTr_v1.0_scaffold00153.42
pacid31558052
tidevm_27.model.AmTr_v1.0_scaffold00153.42.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009765 IEAInterProphotosynthesis, light harvesting
GO:0015979 IEAPLAZA Integrative OrthologyphotosynthesisAT5G54270
GO:0010119 IEAPLAZA Integrative Orthologyregulation of stomatal movementAT5G54270
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT5G54270
GO:0009635 IEAPLAZA Integrative Orthologyresponse to herbicideAT5G54270
GO:0009769 IEAPLAZA Integrative Orthologyphotosynthesis, light harvesting in photosystem IIAT5G54270
GO:0009644 IEAPLAZA Integrative Orthologyresponse to high light intensityAT5G54270

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G54270
GO:0005198 IEAPLAZA Integrative Orthologystructural molecule activityAT5G54270
GO:0019904 IEAPLAZA Integrative Orthologyprotein domain specific bindingAT5G54270

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020 IEAInterPromembrane
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT5G54270
GO:0009579 IEAPLAZA Integrative OrthologythylakoidAT5G54270
GO:0009535 IEAPLAZA Integrative Orthologychloroplast thylakoid membraneAT5G54270
GO:0042651 IEAPLAZA Integrative Orthologythylakoid membraneAT5G54270
GO:0009534 IEAPLAZA Integrative Orthologychloroplast thylakoidAT5G54270

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR023329Chlorophyll a/b binding protein domain
IPR001344Chlorophyll A-B binding protein, plant
IPR022796Chlorophyll A-B binding protein

Mapman id Description
1.1.1.1.1Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.component LHCb1/2/3
No SignalP domains detected for this gene.