Gene: ATR0165G007 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0165G007
Transcript Identifier
ATR0165G007.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00155 : 2187-7337 : positive

Family

Gene family
HOM04M003443
(49 genes in 26 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00155.1
idevm_27.TU.AmTr_v1.0_scaffold00155.1.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00155.1
nameevm_27.model.AmTr_v1.0_scaffold00155.1
pacid31564273
tidevm_27.model.AmTr_v1.0_scaffold00155.1.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0040007 IEAPLAZA Integrative OrthologygrowthAT5G65810
GO:0045488 IEAPLAZA Integrative Orthologypectin metabolic processAT5G65810
GO:0045489 IEAPLAZA Integrative Orthologypectin biosynthetic processAT5G65810
GO:0010394 IEAPLAZA Integrative Orthologyhomogalacturonan metabolic processAT5G65810

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009535 IEAPLAZA Integrative Orthologychloroplast thylakoid membraneAT3G49720
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT3G49720
GO:0005774 IEAPLAZA Integrative Orthologyvacuolar membraneAT3G49720
GO:0000139 IEAPLAZA Integrative OrthologyGolgi membraneAT5G65810
GO:0005794 IEAPLAZA Integrative OrthologyGolgi apparatusAT5G65810
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT3G49720
GO:0005768 IEAPLAZA Integrative OrthologyendosomeAT5G65810
GO:0005802 IEAPLAZA Integrative Orthologytrans-Golgi networkAT5G65810

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR010743Methionine biosynthesis MetW
IPR029063S-adenosyl-L-methionine-dependent methyltransferase

Mapman id Description
21.3.1.1.3.Cell wall organisation.pectin.homogalacturonan.biosynthesis.methyltransferase (CGR)
No SignalP domains detected for this gene.