Gene: ATR0115G007 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0115G007
Transcript Identifier
ATR0115G007.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00175 : 512150-520992 : positive

Family

Gene family
HOM04M001280
(113 genes in 27 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00175.24
idevm_27.TU.AmTr_v1.0_scaffold00175.24.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00175.24
nameevm_27.model.AmTr_v1.0_scaffold00175.24
pacid31572481
tidevm_27.model.AmTr_v1.0_scaffold00175.24.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016567 IEAPLAZA Integrative Orthologyprotein ubiquitinationAT3G06330

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270 IEAInterProzinc ion binding
GO:0004842 IEAPLAZA Integrative Orthologyubiquitin-protein transferase activityAT3G06330

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR033275E3 ubiquitin-protein ligase MARCH-like
IPR011016Zinc finger, RING-CH-type

Mapman id Description
19.2.2.1.5.3.4.Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-v-class E3 ligase
No SignalP domains detected for this gene.