Gene: ATR0113G005 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0113G005
Transcript Identifier
ATR0113G005.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00178 : 577948-579238 : positive

Family

Gene family
HOM04M000785
(168 genes in 24 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00178.11
idevm_27.TU.AmTr_v1.0_scaffold00178.11.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00178.11
nameevm_27.model.AmTr_v1.0_scaffold00178.11
pacid31567411
tidevm_27.model.AmTr_v1.0_scaffold00178.11.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0031936 IEAPLAZA Tree-based Orthologynegative regulation of chromatin silencingAT3G63270

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003682 IEAPLAZA Tree-based Orthologychromatin bindingAT3G63270
GO:0005515 IEAPLAZA Tree-based Orthologyprotein bindingAT3G63270

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886 IEAPLAZA Tree-based Orthologyplasma membraneAT5G12010
GO:0005774 IEAPLAZA Tree-based Orthologyvacuolar membraneAT5G12010
GO:0035098 IEAPLAZA Tree-based OrthologyESC/E(Z) complexAT3G63270
GO:0016020 IEAPLAZA Tree-based OrthologymembraneAT5G12010
GO:0035102 IEAPLAZA Tree-based OrthologyPRC1 complexAT3G63270
GO:0009507 IEAPLAZA Tree-based OrthologychloroplastAT5G12010
GO:0005634 IEAPLAZA Tree-based OrthologynucleusAT3G63270

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR027806Harbinger transposase-derived nuclease domain

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.