Gene: ATR0111G012 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0111G012
Transcript Identifier
ATR0111G012.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00177 : 436168-455739 : negative

Family

Gene family
HOM04M003924
(45 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00177.25
idevm_27.TU.AmTr_v1.0_scaffold00177.25.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00177.25
nameevm_27.model.AmTr_v1.0_scaffold00177.25
pacid31554941
tidevm_27.model.AmTr_v1.0_scaffold00177.25.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016567 IEAInterProprotein ubiquitination
GO:0006511 IEAInterProubiquitin-dependent protein catabolic process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004842 IEAInterProubiquitin-protein transferase activity
GO:0034450 IEAInterProubiquitin-ubiquitin ligase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000151 IEAInterProubiquitin ligase complex
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT5G15400

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR003613U box domain
IPR019474Ubiquitin conjugation factor E4, core

Mapman id Description
19.2.4.3.1.Protein homeostasis.ubiquitin-proteasome system.ER-associated protein degradation (ERAD).substrate processing.E4 multiubiquitination enzyme (UFD2)
No SignalP domains detected for this gene.