Gene: ATR0100G003 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0100G003
Transcript Identifier
ATR0100G003.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00126 : 879629-881118 : negative

Family

Gene family
HOM04M001414
(104 genes in 25 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00126.36
idevm_27.TU.AmTr_v1.0_scaffold00126.36.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00126.36
nameevm_27.model.AmTr_v1.0_scaffold00126.36
pacid31551939
tidevm_27.model.AmTr_v1.0_scaffold00126.36.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007050 IEAInterProcell cycle arrest
GO:0045786 IEAPLAZA Tree-based Orthologynegative regulation of cell cycleAT2G32710
GO:0042023 IEAPLAZA Integrative OrthologyDNA endoreduplicationAT3G19150
GO:0045740 IEAPLAZA Integrative Orthologypositive regulation of DNA replicationAT2G23430
GO:0045736 IEAPLAZA Integrative Orthologynegative regulation of cyclin-dependent protein serine/threonine kinase activityAT1G49620
GO:0048527 IEAPLAZA Integrative Orthologylateral root developmentAT2G23430
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT2G23430
GO:0048367 IEAPLAZA Integrative Orthologyshoot system developmentAT2G23430
GO:0048366 IEAPLAZA Integrative Orthologyleaf developmentAT2G23430
GO:0000082 IEAPLAZA Integrative OrthologyG1/S transition of mitotic cell cycleAT2G23430
GO:0032877 IEAPLAZA Integrative Orthologypositive regulation of DNA endoreduplicationAT3G24810
GO:0010311 IEAPLAZA Integrative Orthologylateral root formationAT2G23430

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004861 IEAInterProcyclin-dependent protein serine/threonine kinase inhibitor activity
GO:0031490 IEAPLAZA Integrative Orthologychromatin DNA bindingAT3G24810
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G49620
GO:0030332 IEAPLAZA Integrative Orthologycyclin bindingAT1G49620

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAInterPronucleus
GO:0001673 IEAPLAZA Integrative Orthologymale germ cell nucleusAT1G49620
GO:0005737 IEAPLAZA Tree-based OrthologycytoplasmAT2G32710

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR003175Cyclin-dependent kinase inhibitor

Mapman id Description
13.1.1.3.1.Cell cycle organisation.cell cycle control.cyclin-dependent regulation.cyclin-dependent protein kinase inhibitor activities.inhibitor (KRP/ICK)
No SignalP domains detected for this gene.