Gene: ATR0068G014 (Amborella trichopoda)

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Gene Identifier
ATR0068G014
Transcript Identifier
ATR0068G014.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00119 : 404515-405987 : positive

Family

Gene family
HOM04M000014
(2446 genes in 27 species)
specific family
Subfamily
ORTHO04M000022
(1115 genes in 27 species)
specific family
Duplication type
Tandem duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00119.25
idevm_27.TU.AmTr_v1.0_scaffold00119.25.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00119.25
nameevm_27.model.AmTr_v1.0_scaffold00119.25
pacid31559410
tidevm_27.model.AmTr_v1.0_scaffold00119.25.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0010029 IEAPLAZA Integrative Orthologyregulation of seed germinationAT5G39610
GO:0010468 IEAPLAZA Integrative Orthologyregulation of gene expressionAT5G39610
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT5G39610
GO:0048527 IEAPLAZA Integrative Orthologylateral root developmentAT5G39610
GO:0009723 IEAPLAZA Integrative Orthologyresponse to ethyleneAT5G39610
GO:0009867 IEAPLAZA Integrative Orthologyjasmonic acid mediated signaling pathwayAT3G29035
GO:0042542 IEAPLAZA Integrative Orthologyresponse to hydrogen peroxideAT5G39610
GO:0010150 IEAPLAZA Integrative Orthologyleaf senescenceAT5G39610
GO:0090400 IEAPLAZA Integrative Orthologystress-induced premature senescenceAT5G39610
GO:1904250 IEAPLAZA Integrative Orthologypositive regulation of age-related resistanceAT5G39610
GO:0006979 IEAPLAZA Integrative Orthologyresponse to oxidative stressAT5G39610
GO:1903648 IEAPLAZA Integrative Orthologypositive regulation of chlorophyll catabolic processAT3G04060
GO:0009414 IEAPLAZA Integrative Orthologyresponse to water deprivationAT3G29035
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT5G39610
GO:0051091 IEAPLAZA Integrative Orthologypositive regulation of sequence-specific DNA binding transcription factor activityAT5G39610
GO:1900057 IEAPLAZA Integrative Orthologypositive regulation of leaf senescenceAT5G39610
GO:0009611 IEAPLAZA Integrative Orthologyresponse to woundingAT3G29035
GO:0043068 IEAPLAZA Integrative Orthologypositive regulation of programmed cell deathAT5G39610
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT5G39610
GO:1902074 IEAPLAZA Integrative Orthologyresponse to saltAT5G39610

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G39610
GO:0042803 IEAPLAZA Integrative Orthologyprotein homodimerization activityAT5G39610
GO:0046982 IEAPLAZA Integrative Orthologyprotein heterodimerization activityAT5G39610
GO:0003700 IEAPLAZA Integrative Orthologytranscription factor activity, sequence-specific DNA bindingAT5G39610
GO:0000975 IEAPLAZA Integrative Orthologyregulatory region DNA bindingAT3G04060
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT5G39610

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT5G18270
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT5G39610

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003441NAC domain

Mapman id Description
15.5.17.RNA biosynthesis.transcriptional regulation.transcription factor (NAC)
No SignalP domains detected for this gene.