Gene: ATR0064G034 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0064G034
Transcript Identifier
ATR0064G034.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00110 : 2077994-2078666 : negative

Family

Gene family
HOM04M000019
(2055 genes in 28 species)
specific family
Subfamily
ORTHO04M000093
(534 genes in 28 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00110.120
idevm_27.TU.AmTr_v1.0_scaffold00110.120.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00110.120
nameevm_27.model.AmTr_v1.0_scaffold00110.120
pacid31552873
tidevm_27.model.AmTr_v1.0_scaffold00110.120.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0005975 IEAPLAZA Homology (enrichment)carbohydrate metabolic process
GO:0009408 IEAPLAZA Integrative Orthologyresponse to heatAT5G08000
GO:0052543 IEAPLAZA Integrative Orthologycallose deposition in cell wallAT5G61130

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0001872 IEAPLAZA Integrative Orthology(1->3)-beta-D-glucan bindingAT5G61130
GO:0004553 IEAPLAZA Homology (enrichment)hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0030247 IEAPLAZA Integrative Orthologypolysaccharide bindingAT5G61130

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT5G61130
GO:0009505 IEAPLAZA Integrative Orthologyplant-type cell wallAT5G61130
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT5G61130
GO:0031225 IEAPLAZA Integrative Orthologyanchored component of membraneAT5G61130
GO:0046658 IEAPLAZA Integrative Orthologyanchored component of plasma membraneAT5G61130

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR012946X8 domain

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.