Gene: ATR0057G065 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0057G065
Transcript Identifier
ATR0057G065.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00111 : 2121295-2127164 : positive

Family

Gene family
HOM04M000036
(1581 genes in 29 species)
specific family
Subfamily
ORTHO04M000886
(132 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00111.127
idevm_27.TU.AmTr_v1.0_scaffold00111.127.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00111.127
nameevm_27.model.AmTr_v1.0_scaffold00111.127
pacid31573663
tidevm_27.model.AmTr_v1.0_scaffold00111.127.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0046686 IEAPLAZA Integrative Orthologyresponse to cadmium ionAT1G02130
GO:0009555 IEAPLAZA Integrative Orthologypollen developmentAT4G17530
GO:0009860 IEAPLAZA Integrative Orthologypollen tube growthAT4G17530
GO:0006888 IEAPLAZA Integrative OrthologyER to Golgi vesicle-mediated transportAT1G02130

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003924 IEAInterProGTPase activity
GO:0005525 IEAInterProGTP binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0032588 IEAPLAZA Integrative Orthologytrans-Golgi network membraneAT1G02130
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT4G17530
GO:0005773 IEAPLAZA Integrative OrthologyvacuoleAT4G17530
GO:0000139 IEAPLAZA Integrative OrthologyGolgi membraneAT1G02130
GO:0005794 IEAPLAZA Integrative OrthologyGolgi apparatusAT4G17530
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT4G17530
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT4G17530
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT4G17530

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001806Small GTPase superfamily
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR005225Small GTP-binding protein domain

Mapman id Description
22.8.1.4.Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.D-class RAB GTPase
No SignalP domains detected for this gene.