Gene: ATR0057G032 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0057G032
Transcript Identifier
ATR0057G032.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00111 : 995362-1002104 : positive

Family

Gene family
HOM04M000657
(193 genes in 29 species)
specific family
Subfamily
ORTHO04M001975
(80 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00111.57
idevm_27.TU.AmTr_v1.0_scaffold00111.57.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00111.57
nameevm_27.model.AmTr_v1.0_scaffold00111.57
pacid31573579
tidevm_27.model.AmTr_v1.0_scaffold00111.57.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006412 IEAInterProtranslation

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003735 IEAInterProstructural constituent of ribosome
GO:0003729 IEAPLAZA Integrative OrthologymRNA bindingAT4G17390

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005840 IEAInterProribosome
GO:0005622 IEAInterProintracellular
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT4G16720
GO:0005730 IEAPLAZA Integrative OrthologynucleolusAT4G17390
GO:0005774 IEAPLAZA Integrative Orthologyvacuolar membraneAT4G16720
GO:0022625 IEAPLAZA Integrative Orthologycytosolic large ribosomal subunitAT4G16720
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT4G16720
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT4G17390
GO:0022626 IEAPLAZA Integrative Orthologycytosolic ribosomeAT4G16720

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR024794Ribosomal protein L15e core domain
IPR000439Ribosomal protein L15e
IPR020925Ribosomal protein L15e, conserved site
IPR012678Ribosomal protein L23/L15e core domain

Mapman id Description
17.1.2.1.16.Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL15
No SignalP domains detected for this gene.