Gene: ATR0057G002 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0057G002
Transcript Identifier
ATR0057G002.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00111 : 277254-299690 : positive

Family

Gene family
HOM04M001554
(96 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00111.18
idevm_27.TU.AmTr_v1.0_scaffold00111.18.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00111.18
nameevm_27.model.AmTr_v1.0_scaffold00111.18
pacid31573601
tidevm_27.model.AmTr_v1.0_scaffold00111.18.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007186 IEAInterProG-protein coupled receptor signaling pathway
GO:0033523 IEAPLAZA Integrative Orthologyhistone H2B ubiquitinationAT2G44950
GO:0016049 IEAPLAZA Integrative Orthologycell growthAT2G44950
GO:0010389 IEAPLAZA Integrative Orthologyregulation of G2/M transition of mitotic cell cycleAT2G44950
GO:0010228 IEAPLAZA Integrative Orthologyvegetative to reproductive phase transition of meristemAT2G44950
GO:0045087 IEAPLAZA Integrative Orthologyinnate immune responseAT2G44950
GO:0009817 IEAPLAZA Integrative Orthologydefense response to fungus, incompatible interactionAT2G44950
GO:0051301 IEAPLAZA Integrative Orthologycell divisionAT2G44950
GO:0048505 IEAPLAZA Integrative Orthologyregulation of timing of cell differentiationAT2G44950
GO:0009965 IEAPLAZA Integrative Orthologyleaf morphogenesisAT2G44950
GO:0006513 IEAPLAZA Integrative Orthologyprotein monoubiquitinationAT2G44950
GO:0010390 IEAPLAZA Integrative Orthologyhistone monoubiquitinationAT2G44950
GO:0010162 IEAPLAZA Integrative Orthologyseed dormancy processAT2G44950

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004871 IEAInterProsignal transducer activity
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT2G44950
GO:0004842 IEAPLAZA Integrative Orthologyubiquitin-protein transferase activityAT2G44950
GO:0042803 IEAPLAZA Integrative Orthologyprotein homodimerization activityAT2G44950

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005834 IEAInterProheterotrimeric G-protein complex
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT2G44950
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT2G44950

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR015898G-protein gamma-like domain

Mapman id Description
19.2.2.1.5.3.2.Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-HC-class E3 ligase
No SignalP domains detected for this gene.