Gene: ATR0049G074 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0049G074
Transcript Identifier
ATR0049G074.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00149 : 223337-227267 : negative

Family

Gene family
HOM04M001643
(91 genes in 29 species)
specific family
Subfamily
ORTHO04M008019
(32 genes in 28 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00149.10
idevm_27.TU.AmTr_v1.0_scaffold00149.10.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00149.10
nameevm_27.model.AmTr_v1.0_scaffold00149.10
pacid31570691
tidevm_27.model.AmTr_v1.0_scaffold00149.10.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006414 IEAInterProtranslational elongation
GO:0009845 IEAPLAZA Integrative Orthologyseed germinationAT1G62750
GO:0009658 IEAPLAZA Integrative Orthologychloroplast organizationAT1G62750
GO:0009791 IEAPLAZA Integrative Orthologypost-embryonic developmentAT1G62750

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005525 IEAInterProGTP binding
GO:0003746 IEAInterProtranslation elongation factor activity
GO:0003924 IEAInterProGTPase activity
GO:0005524 IEAPLAZA Integrative OrthologyATP bindingAT1G62750

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507 IEAInterProchloroplast
GO:0005622 IEAInterProintracellular
GO:0009941 IEAPLAZA Integrative Orthologychloroplast envelopeAT1G62750
GO:0048046 IEAPLAZA Integrative OrthologyapoplastAT1G62750
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT1G62750
GO:0009570 IEAPLAZA Integrative Orthologychloroplast stromaAT1G62750

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005517Translation elongation factor EFG/EF2, domain IV
IPR014721Ribosomal protein S5 domain 2-type fold, subgroup
IPR030848Elongation factor G, chloroplastic
IPR004540Translation elongation factor EFG/EF2
IPR004161Translation elongation factor EFTu-like, domain 2
IPR009022Elongation factor G, III-V domain
IPR000640Translation elongation factor EFG, V domain
IPR000795Transcription factor, GTP-binding domain
IPR031157Tr-type G domain, conserved site
IPR020568Ribosomal protein S5 domain 2-type fold
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR009000Translation protein, beta-barrel domain
IPR005225Small GTP-binding protein domain

Mapman id Description
17.7.4.3.Protein biosynthesis.organelle machinery.translation elongation.elongation factor (EF-G)
No SignalP domains detected for this gene.