Gene: ATR0044G024 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0044G024
Transcript Identifier
ATR0044G024.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00141 : 1355214-1385429 : negative

Family

Gene family
HOM04M000814
(163 genes in 29 species)
specific family
Subfamily
ORTHO04M001571
(92 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00141.41
idevm_27.TU.AmTr_v1.0_scaffold00141.41.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00141.41
nameevm_27.model.AmTr_v1.0_scaffold00141.41
pacid31557007
tidevm_27.model.AmTr_v1.0_scaffold00141.41.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006491 IEAPLAZA Integrative OrthologyN-glycan processingAT1G30000
GO:0048364 IEAPLAZA Integrative Orthologyroot developmentAT1G30000

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004571 IEAInterPromannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509 IEAInterProcalcium ion binding
GO:0004559 IEAPLAZA Integrative Orthologyalpha-mannosidase activityAT1G30000

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020 IEAInterPromembrane
GO:0005794 IEAPLAZA Integrative OrthologyGolgi apparatusAT1G30000
GO:0005768 IEAPLAZA Integrative OrthologyendosomeAT1G30000
GO:0005802 IEAPLAZA Integrative Orthologytrans-Golgi networkAT1G30000

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001382Glycoside hydrolase family 47

Mapman id Description
19.1.1.1.3.Protein homeostasis.protein quality control.ER Quality Control (ERQC) machinery.calnexin/calreticulin chaperone system.alpha-1,2 mannosidase (MNS)
No SignalP domains detected for this gene.