Gene: ATR0044G006 (Amborella trichopoda)

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Gene Identifier
ATR0044G006
Transcript Identifier
ATR0044G006.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00141 : 974346-977356 : negative

Family

Gene family
HOM04M000472
(248 genes in 24 species)
specific family
Subfamily
ORTHO04M005306
(41 genes in 23 species)
specific family
Duplication type
Tandem duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00141.27
idevm_27.TU.AmTr_v1.0_scaffold00141.27.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00141.27
nameevm_27.model.AmTr_v1.0_scaffold00141.27
pacid31557008
tidevm_27.model.AmTr_v1.0_scaffold00141.27.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010015 IEAPLAZA Tree-based Orthologyroot morphogenesisAT5G25460
GO:0080167 IEAPLAZA Tree-based Orthologyresponse to karrikinAT5G25460
GO:1902066 IEAPLAZA Integrative Orthologyregulation of cell wall pectin metabolic processAT2G41800
GO:0051511 IEAPLAZA Integrative Orthologynegative regulation of unidimensional cell growthAT2G41800

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0031225 IEAPLAZA Tree-based Orthologyanchored component of membraneAT2G34510
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT3G08030
GO:0009505 IEAPLAZA Integrative Orthologyplant-type cell wallAT2G41800
GO:0005618 IEAPLAZA Integrative Orthologycell wallAT3G08030
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT2G41800

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR008979Galactose-binding domain-like
IPR006946Domain of unknown function DUF642

Mapman id Description
35.2not assigned.not annotated
No SignalP domains detected for this gene.