Gene: ATR0026G021 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0026G021
Transcript Identifier
ATR0026G021.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00136 : 564537-565573 : positive

Family

Gene family
HOM04M004999
(38 genes in 29 species)
specific family
Duplication type
Tandem duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00136.19
idevm_27.TU.AmTr_v1.0_scaffold00136.19.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00136.19
nameevm_27.model.AmTr_v1.0_scaffold00136.19
pacid31574158
tidevm_27.model.AmTr_v1.0_scaffold00136.19.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016973 IEAPLAZA Integrative Orthologypoly(A)+ mRNA export from nucleusAT2G19560
GO:0009723 IEAPLAZA Integrative Orthologyresponse to ethyleneAT2G19560
GO:0009873 IEAPLAZA Integrative Orthologyethylene-activated signaling pathwayAT2G19560
GO:0048364 IEAPLAZA Integrative Orthologyroot developmentAT2G19560

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622 IEAPLAZA Integrative OrthologyintracellularAT2G19560
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT2G19560
GO:0005623 IEAPLAZA Integrative OrthologycellAT2G19560

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR000717Proteasome component (PCI) domain

Mapman id Description
16.11.2.2.RNA processing.messenger ribonucleoparticle (mRNP) export.TREX-2 mRNP trafficking complex.component PCID2/Thp1
No SignalP domains detected for this gene.