Gene: ATR0016G017 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0016G017
Transcript Identifier
ATR0016G017.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00139 : 880948-882156 : positive

Family

Gene family
HOM04M000010
(3187 genes in 28 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00139.15
idevm_27.TU.AmTr_v1.0_scaffold00139.15.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00139.15
nameevm_27.model.AmTr_v1.0_scaffold00139.15
pacid31563517
tidevm_27.model.AmTr_v1.0_scaffold00139.15.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:2000762 IEAPLAZA Integrative Orthologyregulation of phenylpropanoid metabolic processAT4G38620
GO:0010224 IEAPLAZA Integrative Orthologyresponse to UV-BAT4G38620
GO:0048443 IEAPLAZA Integrative Orthologystamen developmentAT1G22640
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT4G38620
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT1G22640
GO:0009739 IEAPLAZA Integrative Orthologyresponse to gibberellinAT4G09460
GO:0009723 IEAPLAZA Integrative Orthologyresponse to ethyleneAT4G34990
GO:0009800 IEAPLAZA Integrative Orthologycinnamic acid biosynthetic processAT1G22640
GO:0009867 IEAPLAZA Integrative Orthologyjasmonic acid mediated signaling pathwayAT1G22640
GO:0009740 IEAPLAZA Integrative Orthologygibberellic acid mediated signaling pathwayAT1G22640
GO:0009751 IEAPLAZA Integrative Orthologyresponse to salicylic acidAT4G38620
GO:0046686 IEAPLAZA Integrative Orthologyresponse to cadmium ionAT4G34990
GO:0009753 IEAPLAZA Integrative Orthologyresponse to jasmonic acidAT4G38620
GO:0009611 IEAPLAZA Integrative Orthologyresponse to woundingAT1G22640
GO:0009892 IEAPLAZA Integrative Orthologynegative regulation of metabolic processAT1G22640
GO:1900384 IEAPLAZA Integrative Orthologyregulation of flavonol biosynthetic processAT2G16720
GO:0080086 IEAPLAZA Integrative Orthologystamen filament developmentAT1G22640
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT1G22640
GO:1903086 IEAPLAZA Integrative Orthologynegative regulation of sinapate ester biosynthetic processAT4G38620

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT4G38620
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT1G22640

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.