Gene: ATR0001G044 (Amborella trichopoda)

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Gene Identifier
ATR0001G044
Transcript Identifier
ATR0001G044.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00133 : 765655-768596 : negative

Family

Gene family
HOM04M000010
(3187 genes in 28 species)
specific family
Duplication type
Tandem duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00133.30
idevm_27.TU.AmTr_v1.0_scaffold00133.30.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00133.30
nameevm_27.model.AmTr_v1.0_scaffold00133.30
pacid31564991
tidevm_27.model.AmTr_v1.0_scaffold00133.30.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010090 IEAPLAZA Integrative Orthologytrichome morphogenesisAT5G56110
GO:0009555 IEAPLAZA Integrative Orthologypollen developmentAT5G56110
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT5G56110
GO:0055046 IEAPLAZA Integrative OrthologymicrogametogenesisAT3G28470
GO:0048658 IEAPLAZA Integrative Orthologyanther wall tapetum developmentAT5G56110
GO:0052545 IEAPLAZA Integrative Orthologycallose localizationAT3G28470

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0003682 IEAPLAZA Integrative Orthologychromatin bindingAT5G56110
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT5G56110
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G56110

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT5G56110

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.