Gene: ATR0001G031 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0001G031
Transcript Identifier
ATR0001G031.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00133 : 1343568-1347533 : positive

Family

Gene family
HOM04M000423
(271 genes in 28 species)
specific family
Subfamily
ORTHO04M000316
(264 genes in 28 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00133.49
idevm_27.TU.AmTr_v1.0_scaffold00133.49.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00133.49
nameevm_27.model.AmTr_v1.0_scaffold00133.49
pacid31565017
tidevm_27.model.AmTr_v1.0_scaffold00133.49.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010025 IEAPLAZA Integrative Orthologywax biosynthetic processAT4G33790
GO:0010584 IEAPLAZA Integrative Orthologypollen exine formationAT3G11980
GO:0010345 IEAPLAZA Integrative Orthologysuberin biosynthetic processAT3G44550
GO:0010018 IEAPLAZA Integrative Orthologyfar-red light signaling pathwayAT5G22500
GO:0055114 IEAPLAZA Integrative Orthologyoxidation-reduction processAT3G44560
GO:0010017 IEAPLAZA Integrative Orthologyred or far-red light signaling pathwayAT5G22500
GO:0010218 IEAPLAZA Integrative Orthologyresponse to far red lightAT5G22500
GO:0045893 IEAPLAZA Integrative Orthologypositive regulation of transcription, DNA-templatedAT5G22500
GO:0009639 IEAPLAZA Integrative Orthologyresponse to red or far red lightAT5G22500
GO:0042753 IEAPLAZA Integrative Orthologypositive regulation of circadian rhythmAT5G22500
GO:0046686 IEAPLAZA Integrative Orthologyresponse to cadmium ionAT3G11980
GO:0009611 IEAPLAZA Integrative Orthologyresponse to woundingAT3G44550
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT3G11980

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0080019 IEAInterProfatty-acyl-CoA reductase (alcohol-forming) activity
GO:0003700 IEAPLAZA Integrative Orthologytranscription factor activity, sequence-specific DNA bindingAT5G22500
GO:0008705 IEAPLAZA Integrative Orthologymethionine synthase activityAT3G11980
GO:0050062 IEAPLAZA Integrative Orthologylong-chain-fatty-acyl-CoA reductase activityAT3G44550

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT3G11980
GO:0048046 IEAPLAZA Integrative OrthologyapoplastAT3G11980
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT3G11980
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT3G11980
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT5G22500
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT3G11980
GO:0005783 IEAPLAZA Integrative Orthologyendoplasmic reticulumAT4G33790
GO:0009941 IEAPLAZA Integrative Orthologychloroplast envelopeAT3G11980

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR033640Fatty acyl-CoA reductase, C-terminal
IPR026055Fatty acyl-CoA reductase
IPR013120Male sterility, NAD-binding
IPR016040NAD(P)-binding domain

Mapman id Description
21.8.1.3.Cell wall organisation.sporopollenin.biosynthesis.fatty acyl-CoA reductase (MS2)
21.9.1.6.1.Cell wall organisation.cutin and suberin.cuticular lipid formation.acyl-reduction pathway.acyl CoA reductase
No SignalP domains detected for this gene.