Gene: ATR0001G018 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0001G018
Transcript Identifier
ATR0001G018.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00133 : 1290935-1313216 : positive

Family

Gene family
HOM04M000130
(688 genes in 29 species)
specific family
Subfamily
ORTHO04M000592
(174 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00133.47
idevm_27.TU.AmTr_v1.0_scaffold00133.47.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00133.47
nameevm_27.model.AmTr_v1.0_scaffold00133.47
pacid31565014
tidevm_27.model.AmTr_v1.0_scaffold00133.47.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006470 IEAPLAZA Integrative Orthologyprotein dephosphorylationAT3G58500
GO:0080022 IEAPLAZA Integrative Orthologyprimary root developmentAT2G42500
GO:0048863 IEAPLAZA Integrative Orthologystem cell differentiationAT2G42500
GO:0048364 IEAPLAZA Integrative Orthologyroot developmentAT2G42500

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016787 IEAInterProhydrolase activity
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT2G42500
GO:0004721 IEAPLAZA Integrative Orthologyphosphoprotein phosphatase activityAT2G42500

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT2G42500
GO:0000159 IEAPLAZA Integrative Orthologyprotein phosphatase type 2A complexAT3G58500
GO:0005730 IEAPLAZA Integrative OrthologynucleolusAT3G58500
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT3G58500
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT3G58500
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT3G58500

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR029052Metallo-dependent phosphatase-like
IPR004843Calcineurin-like phosphoesterase domain, ApaH type
IPR006186Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase

Mapman id Description
13.4.1.2.3.Cell cycle organisation.cytokinesis.preprophase microtubule organization.TON1-TRM-PP2A (TTP) preprophase band formation complex.catalytic component PP2A-phosphatase
18.4.24.1.2.5.Protein modification.phosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A-class phosphatase complexes.catalytic component C
No SignalP domains detected for this gene.