PLAZA 4.0 Monocots gene overview : AT5G66350

Gene: AT5G66350 (Arabidopsis thaliana)

Curated Summary: A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid.

GO term	Evidence(s)	Provider	Description	Source
GO:0006351	IEA	UniProt	transcription, DNA-templated	1
GO:0006355	IEA	Gene Ontology	regulation of transcription, DNA-templated	1
GO:0007275	IEA	UniProt	multicellular organism development	1
GO:0009734	IEA	UniProt	auxin-activated signaling pathway	1
GO:0009851	IEA	UniProt	auxin biosynthetic process	1
GO:0009739	IMP	UniProt	response to gibberellin	1
GO:0009740	TAS	UniProt	gibberellic acid mediated signaling pathway	1
GO:0009938	IDA	UniProt	negative regulation of gibberellic acid mediated signaling pathway	1 2
GO:0009733	IEA	PLAZA Tree-based Orthology	response to auxin	AT5G12330
GO:0048480	IEA	PLAZA Integrative Orthology	stigma development	AT3G51060
GO:0048479	IEA	PLAZA Integrative Orthology	style development	AT3G51060
GO:0045893	IEA	PLAZA Integrative Orthology	positive regulation of transcription, DNA-templated	AT3G51060
GO:0010051	IEA	PLAZA Integrative Orthology	xylem and phloem pattern formation	AT3G51060
GO:0009299	IEA	PLAZA Tree-based Orthology	mRNA transcription	AT1G19790
GO:0048467	IEA	PLAZA Tree-based Orthology	gynoecium development	AT1G75520
GO:0010252	IEA	PLAZA Integrative Orthology	auxin homeostasis	AT3G51060
GO:0048364	IEA	PLAZA Tree-based Orthology	root development	AT5G12330

GO term	Evidence(s)	Provider	Description	Source
GO:0003677	IEA	UniProt	DNA binding	1
GO:0046872	IEA	UniProt	metal ion binding	1
GO:0003700	TAS	UniProt	transcription factor activity, sequence-specific DNA binding	1
GO:0046982	IPI	UniProt	protein heterodimerization activity	1
GO:0042803	IEA	PLAZA Tree-based Orthology	protein homodimerization activity	AT5G12330

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	ISS, ISM, TAS	UniProt	nucleus	1 2

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR007818	SHI protein family
IPR006511	SHORT INTERNODES, C-terminal
IPR006510	Zinc finger, lateral root primordium type 1

Mapman id	Description
15.5.47	.RNA biosynthesis.transcriptional regulation.transcription factor (SRS)

No SignalP domains detected for this gene.