Gene: AT5G65420 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G65420
Transcript Identifier
AT5G65420.4
Gene Type
Coding gene
Location
Chr5 : 26142300-26143750 : negative

Family

Gene family
HOM04M000224
(429 genes in 29 species)
specific family
Subfamily
ORTHO04M000135
(421 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
CYCLIN D4;1
Curated Summary
Encodes a D-type cyclin CYCD4;1 that physically interacts with CDC2A and is expressed during vascular tissue development, embryogenesis, and formation of lateral root primordia. Its expression is upregulated early during germination.Involved in stomatal cell lineage proliferation in the hypocotyl.
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Identifiers

Type Value
full_nameCYCLIN D4;1
symbolCYCD4;1
tidAT5G65420.4

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007049 IEAGene Ontologycell cycle1
GO:0051301 IEAGene Ontologycell division1
GO:0051726 ISSGene Ontologyregulation of cell cycle1
GO:0009744 IEPGene Ontologyresponse to sucrose1
GO:0010440 IMPGene Ontologystomatal lineage progression1
GO:0007346 IEAPLAZA Tree-based Orthologyregulation of mitotic cell cycleSolyc04g076040.2
GO:0009739 IEAPLAZA Tree-based Orthologyresponse to gibberellinSolyc12g087900.1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016538 ISSGene Ontologycyclin-dependent protein serine/threonine kinase regulator activity1
GO:0005515 IPIGene Ontologyprotein binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEA, ISMGene Ontologynucleus1 2
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT5G10440

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013763Cyclin-like
IPR006671Cyclin, N-terminal
IPR004367Cyclin, C-terminal domain

Mapman id Description
13.1.1.1.4.Cell cycle organisation.cell cycle control.cyclin-dependent regulation.cyclin activities.cyclin (CYCD)
No SignalP domains detected for this gene.