Gene: AT5G65080 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G65080
Transcript Identifier
AT5G65080.3
Gene Type
Coding gene
Location
Chr5 : 25997650-26002211 : positive

Family

Gene family
HOM04M000038
(1510 genes in 29 species)
specific family
Subfamily
ORTHO04M000013
(1412 genes in 29 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Description
K-box region/MADS-box transcription factor family protein
Curated Summary
Is upregulated during vernalization and regulates flowering time. Encodes MADS-domain protein. Two variants encoding proteins of 198 and 184 amino acids have been reported.
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Identifiers

Type Value
AliasAGL68,AGAMOUS-like 68
full_nameMADS AFFECTING FLOWERING 5
symbolMAF5
tidAT5G65080.3

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAGene Ontologyregulation of transcription, DNA-templated1
GO:0006351 IEAUniProttranscription, DNA-templated1
GO:0009908 IEAUniProtflower development1
GO:0009910 IMPUniProtnegative regulation of flower development1
GO:0010048 IEPUniProtvernalization response1
GO:0048587 IGIUniProtregulation of short-day photoperiodism, flowering1
GO:2000028 IGIUniProtregulation of photoperiodism, flowering1
GO:0045944 IEAUniProtpositive regulation of transcription from RNA polymerase II promoter
GO:0010221 IEAPLAZA Integrative Orthologynegative regulation of vernalization responseAT5G65050
GO:0042752 IEAPLAZA Integrative Orthologyregulation of circadian rhythmAT5G10140
GO:0009266 IEAPLAZA Integrative Orthologyresponse to temperature stimulusAT5G10140

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAUniProtDNA binding1
GO:0046983 IEAUniProtprotein dimerization activity1
GO:0003700 IEA, ISS, UniProttranscription factor activity, sequence-specific DNA binding1
GO:0000977 IEAUniProtRNA polymerase II regulatory region sequence-specific DNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEA, ISM, UniProtnucleus1 2
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT5G65070
GO:0043234 IEAPLAZA Integrative Orthologyprotein complexAT5G10140

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002100Transcription factor, MADS-box
IPR002487Transcription factor, K-box

Mapman id Description
15.5.14.RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)
No SignalP domains detected for this gene.