Gene: AT5G63670 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G63670
Transcript Identifier
AT5G63670.1
Gene Type
Coding gene
Location
Chr5 : 25488012-25489247 : positive

Family

Gene family
HOM04M004659
(40 genes in 29 species)
specific family

Descriptions

Description
SPT4 homolog 2
Show more...

Identifiers

Type Value
AliasSPT4-2
symbolSPT42
tidAT5G63670.1
UniProtQ94C60

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0032786 IEAUniProtpositive regulation of DNA-templated transcription, elongation1
GO:0006325 IBAGene Ontologychromatin organization1
GO:0006351 IEAGene Ontologytranscription, DNA-templated1
GO:0006397 IBAGene OntologymRNA processing1
GO:0006414 IEAGene Ontologytranslational elongation1
GO:0034243 IBAGene Ontologyregulation of transcription elongation from RNA polymerase II promoter1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270 IEAUniProtzinc ion binding1
GO:0000993 IBAGene OntologyRNA polymerase II core binding1
GO:0003700 IBAGene Ontologytranscription factor activity, sequence-specific DNA binding1
GO:0003727 IBAGene Ontologysingle-stranded RNA binding1
GO:0003746 IEAGene Ontologytranslation elongation factor activity1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEA, ISM, UniProtnucleus1 2
GO:0032044 IBAGene OntologyDSIF complex1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR022800Spt4/RpoE2 zinc finger
IPR009287Transcription initiation Spt4
IPR029040RNA polymerase subunit RPABC4/transcription elongation factor Spt4

Mapman id Description
15.3.6.3.1.RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.SPT4-SPT5 transcription elongation complex.component SPT4
No SignalP domains detected for this gene.