PLAZA 4.0 Monocots gene overview : AT5G63310

Gene: AT5G63310 (Arabidopsis thaliana)

Overview

Gene Identifier: AT5G63310
Transcript Identifier: AT5G63310.1
Gene Type: Coding gene
Location: Chr5 : 25372122-25373838 : negative

Family

Gene family: HOM04M000586
(212 genes in 29 species)
specific family
Subfamily: ORTHO04M001452
(96 genes in 29 species)
specific family

Descriptions

Description: nucleoside diphosphate kinase 2

Curated Summary: Maintains intracellular dNTP levels except ATP. Plays a role in response to oxidative stress and UV. Involved in phytochrome-mediated light signaling. Participates in auxin-regulated processes, partly through the modulation of auxin transport. H-bonding with His-197 inside the nucleotide-binding pocket is critical for NDPK2 functioning.

Identifiers

Type	Value
Alias	ATNDPK2,ARABIDOPSIS NUCLEOSIDE DIPHOSPHATE KINASE 2,NDPK IA IA,NDPK IA,NUCLEOSIDE DIPHOSPHATE KINASE IA,NDPK1A,NDP KINASE 1A
symbol	NDPK2
tid	AT5G63310.1
UniProt	O64903

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006165	IEA	Gene Ontology	nucleoside diphosphate phosphorylation	1
GO:0006183	IEA	UniProt	GTP biosynthetic process	1
GO:0006228	IEA	UniProt	UTP biosynthetic process	1
GO:0006241	IEA	UniProt	CTP biosynthetic process	1
GO:0009585	IMP	UniProt	red, far-red light phototransduction	1
GO:0042542	IMP, IEP,	UniProt	response to hydrogen peroxide	1 2
GO:0009411	TAS	UniProt	response to UV	1
GO:0009734	IMP	UniProt	auxin-activated signaling pathway	1

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004550	IDA, IEAISS, TAS,	UniProt	nucleoside diphosphate kinase activity	1 2 3
GO:0005524	IEA, ISS,	UniProt	ATP binding	1 2
GO:0046872	IEA	UniProt	metal ion binding	1
GO:0005515	IPI	Gene Ontology	protein binding	1

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0009507	IDA, ISM,	UniProt	chloroplast	1 2
GO:0005634	IDA	UniProt	nucleus	1
GO:0005737	IDA	UniProt	cytoplasm	1
GO:0009941	IDA	UniProt	chloroplast envelope	1
GO:0009570	IDA	UniProt	chloroplast stroma	1
GO:0009579	IDA	UniProt	thylakoid	1

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR034907	Nucleoside diphosphate kinase-like domain
IPR001564	Nucleoside diphosphate kinase
IPR023005	Nucleoside diphosphate kinase, active site

Mapman id	Description
6.3.2.4	.Nucleotide metabolism.deoxynucleotides.salvage pathway.nucleoside diphosphate kinase

No SignalP domains detected for this gene.