Gene: AT5G62540 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G62540
Transcript Identifier
AT5G62540.1
Gene Type
Coding gene
Location
Chr5 : 25104679-25105465 : positive

Family

Gene family
HOM04M000061
(1235 genes in 29 species)
specific family
Subfamily
ORTHO04M001590
(91 genes in 29 species)
specific family

Descriptions

Description
ubiquitin-conjugating enzyme 3
Curated Summary
Encodes a protein predicted to be an E2 ubiquitin conjugating enzyme. It appears homologous to the RAD6 protein in yeast implicated in histone ubiquitination, but, UBC3 has not been experimentally associated with this process.
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Identifiers

Type Value
symbolUBC3
tidAT5G62540.1
UniProtP42746

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000209 IBAUniProtprotein polyubiquitination1
GO:0006281 IBAUniProtDNA repair1
GO:0016574 IBAUniProthistone ubiquitination1
GO:0043161 IBAUniProtproteasome-mediated ubiquitin-dependent protein catabolic process1
GO:0006511 IDA, TAS, UniProtubiquitin-dependent protein catabolic process1 2

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004842 IDA, ISS, UniProtubiquitin-protein transferase activity1 2
GO:0005524 IEAUniProtATP binding1
GO:0031625 IBAUniProtubiquitin protein ligase binding1
GO:0061630 IBAUniProtubiquitin protein ligase activity1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 ISMGene Ontologynucleus1
GO:0005737 IBAUniProtcytoplasm1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000608Ubiquitin-conjugating enzyme E2
IPR016135Ubiquitin-conjugating enzyme/RWD-like
IPR023313Ubiquitin-conjugating enzyme, active site

Mapman id Description
19.2.2.1.4.Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-conjugating E2 protein (UBC)
No SignalP domains detected for this gene.