PLAZA 4.0 Monocots gene overview : AT5G61420

Gene: AT5G61420 (Arabidopsis thaliana)

Overview

Gene Identifier: AT5G61420
Transcript Identifier: AT5G61420.2
Gene Type: Coding gene
Location: Chr5 : 24689475-24690795 : negative

Family

Gene family: HOM04M000010
(3187 genes in 28 species)
specific family
Duplication type: Block duplicate

Descriptions

Description: myb domain protein 28

Curated Summary: Encodes a nuclear localized member of the MYB transcription factor family. Involved in positive regulation of aliphatic glucosinolate biosynthesis.Expression is induced by touch, wounding and glucose.

Identifiers

Type	Value
Alias	AtMYB28,HAG1,HIGH ALIPHATIC GLUCOSINOLATE 1,PMG1,PRODUCTION OF METHIONINE-DERIVED GLUCOSINOLATE 1
symbol	MYB28
tid	AT5G61420.2
UniProt	Q9SPG2

Toolbox

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...the orthologs using the Integrative Orthology Viewer.
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View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006351	IEA	UniProt	transcription, DNA-templated	1
GO:0006355	IEP, ISS,	UniProt	regulation of transcription, DNA-templated	1 2
GO:0006357	IBA	UniProt	regulation of transcription from RNA polymerase II promoter	1
GO:0030154	IBA	UniProt	cell differentiation	1
GO:0009739	IEP	UniProt	response to gibberellin	1
GO:0009751	IEP	UniProt	response to salicylic acid	1
GO:0009753	IEP	UniProt	response to jasmonic acid	1
GO:0010438	TAS	UniProt	cellular response to sulfur starvation	1
GO:0010439	IMP	UniProt	regulation of glucosinolate biosynthetic process	1
GO:0050832	IMP	UniProt	defense response to fungus	1
GO:0009617	IMP	UniProt	response to bacterium	1
GO:0009682	IMP	UniProt	induced systemic resistance	1
GO:0009625	IEP	UniProt	response to insect	1

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003677	ISS, IEA	Gene Ontology	DNA binding	1
GO:0000981	IBA	UniProt	RNA polymerase II transcription factor activity, sequence-specific DNA binding	1
GO:0001135	IBA	UniProt	transcription factor activity, RNA polymerase II transcription factor recruiting	1
GO:0044212	IBA	UniProt	transcription regulatory region DNA binding	1
GO:0003700	ISS, NAS,	UniProt	transcription factor activity, sequence-specific DNA binding	1 2
GO:0043565	IPI	UniProt	sequence-specific DNA binding	1 2

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	IDA, ISM,	UniProt	nucleus	1 2

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR001005	SANT/Myb domain
IPR017930	Myb domain
IPR009057	Homeobox domain-like

Mapman id	Description
15.5.2.1	.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)

No SignalP domains detected for this gene.