PLAZA 4.0 Monocots gene overview : AT5G60890

Gene: AT5G60890 (Arabidopsis thaliana)

Overview

Gene Identifier: AT5G60890
Transcript Identifier: AT5G60890.1
Gene Type: Coding gene
Location: Chr5 : 24495029-24496220 : positive

Family

Gene family: HOM04M000010
(3187 genes in 28 species)
specific family

Descriptions

Description: myb domain protein 34

Curated Summary: Myb-like transcription factor that modulates expression of ASA1, a key point of control in the tryptophan pathway; mutant has deregulated expression of ASA1 in dominant allele. Loss of function allele suggests ATR1 also functions at a control point for regulating indole glucosinolate homeostasis.

Identifiers

Type	Value
Alias	ATMYB34,ATR1,ALTERED TRYPTOPHAN REGULATION 1
symbol	MYB34
tid	AT5G60890.1
UniProt	O64399

Toolbox

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006351	IEA	UniProt	transcription, DNA-templated	1
GO:0006357	IBA	UniProt	regulation of transcription from RNA polymerase II promoter	1
GO:0030154	IBA	UniProt	cell differentiation	1
GO:0009759	IMP	UniProt	indole glucosinolate biosynthetic process	1
GO:0009753	IEP	UniProt	response to jasmonic acid	1
GO:0010438	TAS	UniProt	cellular response to sulfur starvation	1
GO:0002213	IMP	UniProt	defense response to insect	1
GO:0000162	IMP	UniProt	tryptophan biosynthetic process	1
GO:0045893	IMP	UniProt	positive regulation of transcription, DNA-templated	1
GO:0009414	IEA	PLAZA Integrative Orthology	response to water deprivation	AT5G07700
GO:0009733	IEA	PLAZA Integrative Orthology	response to auxin	AT5G07700
GO:0009625	IEA	PLAZA Integrative Orthology	response to insect	AT5G07700
GO:0006355	IEA	PLAZA Integrative Orthology	regulation of transcription, DNA-templated	AT1G74080
GO:0009611	IEA	PLAZA Integrative Orthology	response to wounding	AT5G07700
GO:0010439	IEA	PLAZA Integrative Orthology	regulation of glucosinolate biosynthetic process	AT5G07700

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003677	ISS, IEA	Gene Ontology	DNA binding	1
GO:0000981	IBA	UniProt	RNA polymerase II transcription factor activity, sequence-specific DNA binding	1
GO:0001135	IBA	UniProt	transcription factor activity, RNA polymerase II transcription factor recruiting	1
GO:0044212	IBA	UniProt	transcription regulatory region DNA binding	1
GO:0003700	ISS	UniProt	transcription factor activity, sequence-specific DNA binding	1
GO:0043565	IPI	UniProt	sequence-specific DNA binding	1 2
GO:0016301	TAS	Gene Ontology	kinase activity	1

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	IDA, ISM,	UniProt	nucleus	1 2
GO:0009506	IEA	PLAZA Integrative Orthology	plasmodesma	AT1G74080

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR001005	SANT/Myb domain
IPR017930	Myb domain
IPR009057	Homeobox domain-like

Mapman id	Description
15.5.2.1	.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)

No SignalP domains detected for this gene.