Gene: AT5G60890 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G60890
Transcript Identifier
AT5G60890.1
Gene Type
Coding gene
Location
Chr5 : 24495029-24496220 : positive

Family

Gene family
HOM04M000010
(3187 genes in 28 species)
specific family

Descriptions

Description
myb domain protein 34
Curated Summary
Myb-like transcription factor that modulates expression of ASA1, a key point of control in the tryptophan pathway; mutant has deregulated expression of ASA1 in dominant allele. Loss of function allele suggests ATR1 also functions at a control point for regulating indole glucosinolate homeostasis.
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Identifiers

Type Value
AliasATMYB34,ATR1,ALTERED TRYPTOPHAN REGULATION 1
symbolMYB34
tidAT5G60890.1
UniProtO64399

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351 IEAUniProttranscription, DNA-templated1
GO:0006357 IBAUniProtregulation of transcription from RNA polymerase II promoter1
GO:0030154 IBAUniProtcell differentiation1
GO:0009759 IMPUniProtindole glucosinolate biosynthetic process1
GO:0009753 IEPUniProtresponse to jasmonic acid1
GO:0010438 TASUniProtcellular response to sulfur starvation1
GO:0002213 IMPUniProtdefense response to insect1
GO:0000162 IMPUniProttryptophan biosynthetic process1
GO:0045893 IMPUniProtpositive regulation of transcription, DNA-templated1
GO:0009414 IEAPLAZA Integrative Orthologyresponse to water deprivationAT5G07700
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT5G07700
GO:0009625 IEAPLAZA Integrative Orthologyresponse to insectAT5G07700
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT1G74080
GO:0009611 IEAPLAZA Integrative Orthologyresponse to woundingAT5G07700
GO:0010439 IEAPLAZA Integrative Orthologyregulation of glucosinolate biosynthetic processAT5G07700

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 ISS, IEAGene OntologyDNA binding1
GO:0000981 IBAUniProtRNA polymerase II transcription factor activity, sequence-specific DNA binding1
GO:0001135 IBAUniProttranscription factor activity, RNA polymerase II transcription factor recruiting1
GO:0044212 IBAUniProttranscription regulatory region DNA binding1
GO:0003700 ISSUniProttranscription factor activity, sequence-specific DNA binding1
GO:0043565 IPIUniProtsequence-specific DNA binding1 2
GO:0016301 TASGene Ontologykinase activity1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IDA, ISM, UniProtnucleus1 2
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT1G74080

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.