Gene: AT5G58003 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G58003
Transcript Identifier
AT5G58003.1
Gene Type
Coding gene
Location
Chr5 : 23480066-23481924 : positive

Family

Gene family
HOM04M001103
(127 genes in 29 species)
specific family
Subfamily
ORTHO04M003151
(59 genes in 28 species)
specific family

Descriptions

Description
C-terminal domain phosphatase-like 4
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Identifiers

Type Value
symbolCPL4
tidAT5G58003.1
UniProtQ00IB6

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351 IEAUniProttranscription, DNA-templated1
GO:0070940 IBAUniProtdephosphorylation of RNA polymerase II C-terminal domain1
GO:0009651 IEPUniProtresponse to salt stress1
GO:0045892 IMPUniProtnegative regulation of transcription, DNA-templated
GO:1900033 IMPUniProtnegative regulation of trichome patterning
GO:0006357 IBAUniProtregulation of transcription from RNA polymerase II promoter
GO:0048629 IMPUniProttrichome patterning

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004721 IEAUniProtphosphoprotein phosphatase activity
GO:0003723 IEAUniProtRNA binding1
GO:0008420 IBAUniProtCTD phosphatase activity1
GO:0046872 IEAUniProtmetal ion binding1
GO:0008022 IPIUniProtprotein C-terminus binding1
GO:0000981 IBAUniProtRNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0043565 IBAUniProtsequence-specific DNA binding
GO:0001135 IBAUniProttranscription factor activity, RNA polymerase II transcription factor recruiting
GO:0044212 IBAUniProttranscription regulatory region DNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IDA, IEA, ISM, UniProtnucleus1 2
GO:0016591 IBAUniProtDNA-directed RNA polymerase II, holoenzyme1
GO:0005789 IEAUniProtendoplasmic reticulum membrane
GO:0016021 IEAUniProtintegral component of membrane

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001357BRCT domain
IPR023214HAD-like domain
IPR004274FCP1 homology domain
IPR011947FCP1-like phosphatase, phosphatase domain

Mapman id Description
15.3.2.3.RNA biosynthesis.RNA polymerase II-dependent transcription.RNA polymerase-II phosphorylation/dephosphorylation.group-II phosphatase
18.4.25.1.6.Protein modification.phosphorylation.aspartate-based protein phosphatase superfamily.FCP phosphatase families.subcluster H/CPL3-4 phosphatase
No SignalP domains detected for this gene.