Gene: AT5G55720 (Arabidopsis thaliana)

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Gene Identifier
AT5G55720
Transcript Identifier
AT5G55720.1
Gene Type
Coding gene
Location
Chr5 : 22556047-22557496 : positive

Family

Gene family
HOM04M000204
(452 genes in 27 species)
specific family
Subfamily
ORTHO04M000174
(354 genes in 27 species)
specific family

Descriptions

Description
Pectin lyase-like superfamily protein
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Identifiers

Type Value
tidAT5G55720.1
UniProtQ9FM66

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0045490 IEAGene Ontologypectin catabolic process1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016829 ISSGene Ontologylyase activity1
GO:0030570 IEA, ISSGene Ontologypectate lyase activity1 2
GO:0046872 IEAGene Ontologymetal ion binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886 ISMGene Ontologyplasma membrane1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR012334Pectin lyase fold
IPR002022Pectate lyase/Amb allergen
IPR018082AmbAllergen
IPR011050Pectin lyase fold/virulence factor

Mapman id Description
21.3.5.2.Cell wall organisation.pectin.modification and degradation.pectate lyase
No SignalP domains detected for this gene.