Gene: AT5G55540 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G55540
Transcript Identifier
AT5G55540.1
Gene Type
Coding gene
Location
Chr5 : 22496322-22500543 : negative

Family

Gene family
HOM04M003983
(44 genes in 23 species)
specific family

Descriptions

Description
tornado 1
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Identifiers

Type Value
AliasLOP1,LOPPED 1
full_nameTORNADO 1
symbolTRN1
tidAT5G55540.1
UniProtQ9FJ57

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009734 IEAUniProtauxin-activated signaling pathway1
GO:0009933 IMPUniProtmeristem structural organization1
GO:0009956 IMPUniProtradial pattern formation1
GO:0009926 IDA, IGI, UniProtauxin polar transport1 2
GO:0010305 IMPUniProtleaf vascular tissue pattern formation1
GO:0009825 IMPUniProtmultidimensional cell growth1
GO:0009965 IMPUniProtleaf morphogenesis1
GO:0010540 IMPUniProtbasipetal auxin transport1
GO:0035280 IGIUniProtmiRNA loading onto RISC involved in gene silencing by miRNA
GO:0006607 IBAUniProtNLS-bearing protein import into nucleus
GO:0051170 IDAUniProtnuclear import
GO:0000060 IBAUniProtprotein import into nucleus, translocation
GO:0006610 IBAUniProtribosomal protein import into nucleus

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005525 IEAUniProtGTP binding1
GO:0016787 IEAUniProthydrolase activity1
GO:0008139 IBAUniProtnuclear localization sequence binding
GO:0008565 IDAUniProtprotein transporter activity
GO:0008536 IEAUniProtRan GTPase binding
GO:0005515 IEAPLAZA Homology (enrichment)protein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737 IDA, ISM, UniProtcytoplasm1
GO:0016021 IEAUniProtintegral component of membrane1
GO:0005829 IDAUniProtcytosol1
GO:0031965 IBAUniProtnuclear membrane
GO:0034399 IBAUniProtnuclear periphery
GO:0005654 IEAUniProtnucleoplasm
GO:0005634 IDAUniProtnucleus

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR032675Leucine-rich repeat domain, L domain-like
IPR032171C-terminal of Roc (COR) domain
IPR027417P-loop containing nucleoside triphosphate hydrolase

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.