Gene: AT5G55480 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G55480
Transcript Identifier
AT5G55480.1
Gene Type
Coding gene
Location
Chr5 : 22474277-22477819 : positive

Family

Gene family
HOM04M000952
(144 genes in 27 species)
specific family
Subfamily
ORTHO04M000934
(129 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
SHV3-like 1
Curated Summary
Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development.
Show more...

Identifiers

Type Value
AliasGDPDL4,Glycerophosphodiester phosphodiesterase (GDPD) like 4,GPDL1,glycerophosphodiesterase-like 1
symbolSVL1
tidAT5G55480.1
UniProtQ9FJ62

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006629 IEAUniProtlipid metabolic process1
GO:0006071 IEA, ISS, UniProtglycerol metabolic process1 2
GO:0010026 IGIUniProttrichome differentiation1
GO:0010442 IGIUniProtguard cell morphogenesis1
GO:0052541 IGIUniProtplant-type cell wall cellulose metabolic process1
GO:0030643 IEAPLAZA Integrative Orthologycellular phosphate ion homeostasisAT1G66970
GO:0009932 IEAPLAZA Integrative Orthologycell tip growthAT4G26690
GO:0006952 IEAPLAZA Integrative Orthologydefense responseAT1G66980
GO:0048765 IEAPLAZA Integrative Orthologyroot hair cell differentiationAT4G26690
GO:0006968 IEAPLAZA Integrative Orthologycellular defense responseAT1G66980
GO:0010053 IEAPLAZA Integrative Orthologyroot epidermal cell differentiationAT4G26690

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008081 IEAInterProphosphoric diester hydrolase activity
GO:0008889 IEA, ISS, UniProtglycerophosphodiester phosphodiesterase activity1 2
GO:0005509 IEAPLAZA Integrative Orthologycalcium ion bindingAT1G66970

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886 IDA, ISM, UniProtplasma membrane1 2
GO:0031225 TASUniProtanchored component of membrane1
GO:0046658 IDAUniProtanchored component of plasma membrane1
GO:0009506 IDAUniProtplasmodesma1
GO:0009505 IEAPLAZA Integrative Orthologyplant-type cell wallAT4G26690
GO:0048046 IEAPLAZA Integrative OrthologyapoplastAT1G66970
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT1G66970

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR017946PLC-like phosphodiesterase, TIM beta/alpha-barrel domain
IPR030395Glycerophosphodiester phosphodiesterase domain

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.