Gene: AT5G54650 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G54650
Transcript Identifier
AT5G54650.1
Gene Type
Coding gene
Location
Chr5 : 22197856-22201649 : negative

Family

Gene family
HOM04M000342
(321 genes in 28 species)
specific family
Subfamily
ORTHO04M000251
(301 genes in 29 species)
specific family

Descriptions

Description
formin homology5
Curated Summary
Encodes a protein with similarity to formins that is involved in cytokinesis. Loss of function mutations exhibit delayed cellularization during endosperm development. FH5 is expressed in the endosperm and the protein localizes to the cell plate. FH5 was shown to be a maternally expressed imprinted gene.
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Identifiers

Type Value
AliasATFH5,FORMIN HOMOLOGY 5
symbolFh5
tidAT5G54650.1
UniProtQ94B77

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009960 IMPGene Ontologyendosperm development1
GO:0030041 IDAGene Ontologyactin filament polymerization1
GO:0045010 IDAGene Ontologyactin nucleation1
GO:0048317 IGIGene Ontologyseed morphogenesis1
GO:0009932 IEAPLAZA Tree-based Orthologycell tip growthAT1G70140
GO:0030036 IEAPLAZA Tree-based Orthologyactin cytoskeleton organizationAT3G25500
GO:0051016 IEAPLAZA Tree-based Orthologybarbed-end actin filament cappingAT3G25500

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003779 ISSGene Ontologyactin binding1
GO:0005522 IEAPLAZA Tree-based Orthologyprofilin bindingAT1G70140
GO:0005515 IEAPLAZA Tree-based Orthologyprotein bindingAT1G24150
GO:0051015 IEAPLAZA Tree-based Orthologyactin filament bindingAT3G25500

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886 ISMGene Ontologyplasma membrane1
GO:0016021 IEAGene Ontologyintegral component of membrane1
GO:0005618 IDAGene Ontologycell wall1
GO:0005737 IDAGene Ontologycytoplasm1
GO:0009524 IDAGene Ontologyphragmoplast1
GO:0005730 IEAPLAZA Tree-based OrthologynucleolusAT5G67470
GO:0005819 IEAPLAZA Tree-based OrthologyspindleAT5G67470
GO:0016020 IEAPLAZA Tree-based OrthologymembraneAT3G25500
GO:0005911 IEAPLAZA Tree-based Orthologycell-cell junctionAT1G24150
GO:0005634 IEAPLAZA Tree-based OrthologynucleusAT5G67470

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015425Formin, FH2 domain

Mapman id Description
20.2.2.6.1.Cytoskeleton organisation.microfilament network.actin polymerisation.formin actin filament elongation factor activities.group-I formin
No SignalP domains detected for this gene.