Gene: AT5G53950 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G53950
Transcript Identifier
AT5G53950.1
Gene Type
Coding gene
Location
Chr5 : 21901966-21903795 : negative

Family

Gene family
HOM04M000014
(2446 genes in 27 species)
specific family
Subfamily
ORTHO04M000022
(1115 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Curated Summary
Transcriptional activator of the NAC gene family, with CUC1 redundantly required for embryonic apical meristem formation, cotyledon separation and expression of STM. Proper timing of CUC2 expression is required to maintain the phyllotactic pattern initiated in the meristem. CUC2 expression in leaf sinus region is required for serration and the extent of serration is modulated by mir164A mediated repression of CUC2.
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Identifiers

Type Value
AliasANAC098,Arabidopsis NAC domain containing protein 98,ATCUC2,CUP-SHAPED COTYLEDON 2
full_nameCUP-SHAPED COTYLEDON 2
symbolCUC2
tidAT5G53950.1
UniProtO04017

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAGene Ontologyregulation of transcription, DNA-templated1
GO:0006351 IEAUniProttranscription, DNA-templated1
GO:0007275 ISSGene Ontologymulticellular organism development1
GO:0010072 IGIUniProtprimary shoot apical meristem specification1
GO:0048366 IMPUniProtleaf development1
GO:0090709 IMPUniProtregulation of timing of plant organ formation1
GO:0010223 IMPUniProtsecondary shoot formation1
GO:0090691 IGIUniProtformation of plant organ boundary1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAUniProtDNA binding1
GO:0003700 ISSUniProttranscription factor activity, sequence-specific DNA binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEA, ISM, UniProtnucleus1 2

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003441NAC domain

Mapman id Description
15.5.17.RNA biosynthesis.transcriptional regulation.transcription factor (NAC)
No SignalP domains detected for this gene.