Gene: AT5G49720 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G49720
Transcript Identifier
AT5G49720.1
Gene Type
Coding gene
Location
Chr5 : 20197765-20200168 : negative

Family

Gene family
HOM04M000115
(754 genes in 28 species)
specific family
Subfamily
ORTHO04M001324
(101 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
glycosyl hydrolase 9A1
Curated Summary
Encodes a membrane-bound endo-1,4-beta-D-glucanase, involved in cellulose biosynthesis. Loss-of-function mutants have severe cellulose-deficient phenotypes. During cell elongation, KOR1 is associated with Golgi apparatus and early endosome. Inhibition of cellulose biosynthesis promoted a redistribution of KOR1 in subcellular locations. These observations suggest that deposition of cellulose involves the intracellular cycling of KOR1.
Show more...

Identifiers

Type Value
AliasATGH9A1,glycosyl hydrolase 9A1,DEC,DEFECTIVE CYTOKINESIS,IRX2,IRREGULAR XYLEM 2,KOR1,KORRIGAN 1,KOR,KORRIGAN,RSW2,RADIALLY SWOLLEN 2,TSD1,TUMOROUS SHOOT DEVELOPMENT 1
symbolGH9A1
tidAT5G49720.1
UniProtQ38890

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0005975 IEAInterProcarbohydrate metabolic process
GO:0030245 IEAGene Ontologycellulose catabolic process1
GO:0071555 IEAGene Ontologycell wall organization1
GO:0009826 IMPGene Ontologyunidimensional cell growth1
GO:0009735 IMPGene Ontologyresponse to cytokinin1
GO:0048367 IMPGene Ontologyshoot system development1
GO:0030244 IMP, TASGene Ontologycellulose biosynthetic process1 2
GO:0042538 IMPGene Ontologyhyperosmotic salinity response1
GO:0043622 IMPGene Ontologycortical microtubule organization1
GO:0009624 IEAPLAZA Integrative Orthologyresponse to nematodeAT4G24260

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004553 ISS, IEAGene Ontologyhydrolase activity, hydrolyzing O-glycosyl compounds1
GO:0003824 IEAInterProcatalytic activity
GO:0008810 ISSGene Ontologycellulase activity1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886 IDA, ISMGene Ontologyplasma membrane1 2
GO:0016021 IEAGene Ontologyintegral component of membrane1
GO:0009504 IDAGene Ontologycell plate1
GO:0005769 IDAGene Ontologyearly endosome1
GO:0005794 IDAGene OntologyGolgi apparatus1
GO:0005768 IDAGene Ontologyendosome1
GO:0005802 IDAGene Ontologytrans-Golgi network1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001701Glycoside hydrolase family 9
IPR033126Glycosyl hydrolases family 9, Asp/Glu active sites
IPR018221Glycoside hydrolase family 9, His active site
IPR008928Six-hairpin glycosidase-like

Mapman id Description
21.1.1.1.2.Cell wall organisation.cellulose.cellulose synthase complex (CSC).CSC components.associated endo-1,4-beta-glucanase component KOR
No SignalP domains detected for this gene.