Gene: AT5G49620 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G49620
Transcript Identifier
AT5G49620.1
Gene Type
Coding gene
Location
Chr5 : 20137491-20139384 : negative

Family

Gene family
HOM04M000010
(3187 genes in 28 species)
specific family
Duplication type
Tandem duplicate

Descriptions

Description
myb domain protein 78
Curated Summary
Member of the R2R3 factor gene family.
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Identifiers

Type Value
AliasAtMYB78,myb domain protein 78
symbolMYB78
tidAT5G49620.1
UniProtQ9FGY3

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351 IEAUniProttranscription, DNA-templated1
GO:0006355 IEA, ISSGene Ontologyregulation of transcription, DNA-templated1 2
GO:0006357 IBAGene Ontologyregulation of transcription from RNA polymerase II promoter1
GO:0030154 IBAGene Ontologycell differentiation1
GO:0009737 IEPUniProtresponse to abscisic acid1
GO:0009651 IEPUniProtresponse to salt stress1
GO:1902074 IEPUniProtresponse to salt1
GO:0009753 IEAPLAZA Integrative Orthologyresponse to jasmonic acidAT3G06490
GO:0009620 IEAPLAZA Integrative Orthologyresponse to fungusAT3G06490
GO:0009723 IEAPLAZA Integrative Orthologyresponse to ethyleneAT3G06490

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEA, ISSGene OntologyDNA binding1 2
GO:0000981 IBAGene OntologyRNA polymerase II transcription factor activity, sequence-specific DNA binding1
GO:0001135 IBAGene Ontologytranscription factor activity, RNA polymerase II transcription factor recruiting1
GO:0044212 IBAGene Ontologytranscription regulatory region DNA binding1
GO:0003700 ISSUniProttranscription factor activity, sequence-specific DNA binding1
GO:0043565 IPIUniProtsequence-specific DNA binding1 2

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEA, IBA, ISM, UniProtnucleus1 2 3

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.