Gene: AT5G49270 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G49270
Transcript Identifier
AT5G49270.1
Gene Type
Coding gene
Location
Chr5 : 19972021-19974398 : negative

Family

Gene family
HOM04M001482
(100 genes in 27 species)
specific family

Descriptions

Description
COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
Curated Summary
Involved in successfully establishing tip growth in root hairs.
Show more...

Identifiers

Type Value
AliasCOBL9,COBRA-LIKE 9,DER9,DEFORMED ROOT HAIRS 9,MRH4,MUTANT ROOT HAIR 4
full_nameSHAVEN 2
symbolSHV2
tidAT5G49270.1
UniProtQ9FJ13

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010215 IEAGene Ontologycellulose microfibril organization1
GO:0016049 IEAInterProcell growth
GO:0009932 IMPGene Ontologycell tip growth1
GO:0010053 IMPGene Ontologyroot epidermal cell differentiation1
GO:0048765 IMPGene Ontologyroot hair cell differentiation1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0031225 TAS, IEAGene Ontologyanchored component of membrane1
GO:0005886 IEA, ISMGene Ontologyplasma membrane1 2
GO:0046658 IEAPLAZA Tree-based Orthologyanchored component of plasma membraneAT4G16120
GO:0005794 IEAPLAZA Tree-based OrthologyGolgi apparatusAT4G16120
GO:0005768 IEAPLAZA Tree-based OrthologyendosomeAT4G16120
GO:0009506 IEAPLAZA Tree-based OrthologyplasmodesmaAT4G16120
GO:0005802 IEAPLAZA Tree-based Orthologytrans-Golgi networkAT4G16120

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR006918COBRA, plant

Mapman id Description
21.1.2.2.Cell wall organisation.cellulose.cellulose-hemicellulose network assembly.regulatory protein (COB)
No SignalP domains detected for this gene.