Gene: AT5G48400 (Arabidopsis thaliana)

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Gene Identifier
AT5G48400
Transcript Identifier
AT5G48400.2
Gene Type
Coding gene
Location
Chr5 : 19616244-19619246 : positive

Family

Gene family
HOM04M000132
(677 genes in 28 species)
specific family
Subfamily
ORTHO04M000074
(640 genes in 28 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Description
Glutamate receptor family protein
Curated Summary
member of Putative ligand-gated ion channel subunit family
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Identifiers

Type Value
symbolATGLR1.2
tidAT5G48400.2
UniProtQ9LV72

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006874 NASGene Ontologycellular calcium ion homeostasis1
GO:0009416 NASGene Ontologyresponse to light stimulus1
GO:0030003 IEAPLAZA Integrative Orthologycellular cation homeostasisAT3G07520
GO:0006816 IEAPLAZA Integrative Orthologycalcium ion transportAT3G07520
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT3G04110
GO:0006814 IEAPLAZA Integrative Orthologysodium ion transportAT3G04110
GO:0006813 IEAPLAZA Integrative Orthologypotassium ion transportAT3G04110

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004970 IEAGene Ontologyionotropic glutamate receptor activity1
GO:0005217 ISSGene Ontologyintracellular ligand-gated ion channel activity1
GO:0005515 IPIGene Ontologyprotein binding1
GO:0005267 IEAPLAZA Integrative Orthologypotassium channel activityAT3G04110
GO:0005272 IEAPLAZA Integrative Orthologysodium channel activityAT3G04110
GO:0005261 IEAPLAZA Integrative Orthologycation channel activityAT3G07520
GO:0005262 IEAPLAZA Integrative Orthologycalcium channel activityAT3G07520

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020 IEAInterPromembrane
GO:0005576 ISMGene Ontologyextracellular region1
GO:0016021 IEAGene Ontologyintegral component of membrane1
GO:0005623 IEAPLAZA Integrative OrthologycellAT3G07520

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001320Ionotropic glutamate receptor
IPR001638Solute-binding protein family 3/N-terminal domain of MltF
IPR001828Receptor, ligand binding region
IPR017103Ionotropic glutamate receptor, plant
IPR028082Periplasmic binding protein-like I

Mapman id Description
24.3.9.Solute transport.channels.ligand-gated cation channel (GLR)
No SignalP domains detected for this gene.