Gene: AT5G46700 (Arabidopsis thaliana)

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Gene Identifier
AT5G46700
Transcript Identifier
AT5G46700.1
Gene Type
Coding gene
Location
Chr5 : 18951035-18952439 : positive

Family

Gene family
HOM04M000286
(363 genes in 27 species)
specific family
Subfamily
ORTHO04M000477
(200 genes in 27 species)
specific family

Descriptions

Description
Tetraspanin family protein
Curated Summary
Encodes a transmembrane protein of the tetraspanin (TET) family, one of 17 members found in Arabidopsis. Double mutant analysis showed that TRN1 and TRN2 act in the same pathway. Required for the maintenance of both the radial pattern of tissue differentiation in the root and for the subsequent circumferential pattern within the epidermis.
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Identifiers

Type Value
AliasTET1,TETRASPANIN 1
full_nameTORNADO 2
symbolTRN2
tidAT5G46700.1
UniProtQ9FIQ5

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007568 ISSGene Ontologyaging1
GO:0009933 IMPUniProtmeristem structural organization1
GO:0009956 IMPUniProtradial pattern formation1
GO:0010015 IMPUniProtroot morphogenesis1
GO:0010305 IMPUniProtleaf vascular tissue pattern formation1
GO:0009734 IEAUniProtauxin-activated signaling pathway
GO:0009554 IMPUniProtmegasporogenesis
GO:0009934 IMPUniProtregulation of meristem structural organization
GO:0048527 IEAPLAZA Tree-based Orthologylateral root developmentAT2G03840
GO:0080022 IEAPLAZA Tree-based Orthologyprimary root developmentAT2G03840
GO:0050829 IEAPLAZA Tree-based Orthologydefense response to Gram-negative bacteriumAT2G23810
GO:0035265 IEAPLAZA Tree-based Orthologyorgan growthAT3G12090

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003674 NDGene Ontologymolecular_function1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016021 IEAUniProtintegral component of membrane
GO:0005886 IDAUniProtplasma membrane1
GO:0009506 IDAUniProtplasmodesma1
GO:0005794 IEAPLAZA Tree-based OrthologyGolgi apparatusAT2G23810
GO:0016020 IEAPLAZA Tree-based OrthologymembraneAT2G23810

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR018499Tetraspanin/Peripherin

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.