Gene: AT5G45140 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G45140
Transcript Identifier
AT5G45140.1
Gene Type
Coding gene
Location
Chr5 : 18247416-18257713 : negative

Family

Gene family
HOM04M000521
(231 genes in 29 species)
specific family
Subfamily
ORTHO04M004728
(44 genes in 28 species)
specific family

Descriptions

Description
nuclear RNA polymerase C2
Curated Summary
Encodes a subunit of RNA polymerase III (aka RNA polymerase C).
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Identifiers

Type Value
symbolNRPC2
tidAT5G45140.1
UniProtF4KD38

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351 IEA, ISSUniProttranscription, DNA-templated1
GO:0009561 IMPUniProtmegagametogenesis
GO:0006383 IEAUniProttranscription from RNA polymerase III promoter

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003899 IEA, ISS, UniProtDNA-directed 5'-3' RNA polymerase activity1
GO:0032549 IEAUniProtribonucleoside binding
GO:0003677 IEA, ISS, UniProtDNA binding1
GO:0001056 IBAGene OntologyRNA polymerase III activity1
GO:0046872 IEAUniProtmetal ion binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005666 IBAUniProtDNA-directed RNA polymerase III complex1
GO:0009507 ISMGene Ontologychloroplast1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015712DNA-directed RNA polymerase, subunit 2
IPR007120DNA-directed RNA polymerase, subunit 2, domain 6
IPR007646RNA polymerase Rpb2, domain 4
IPR007641RNA polymerase Rpb2, domain 7
IPR007644RNA polymerase, beta subunit, protrusion
IPR007645RNA polymerase Rpb2, domain 3
IPR007647RNA polymerase Rpb2, domain 5
IPR007642RNA polymerase Rpb2, domain 2
IPR007121RNA polymerase, beta subunit, conserved site

Mapman id Description
15.1.3.2.RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol III catalytic components.subunit 2
No SignalP domains detected for this gene.