Gene: AT5G44360 (Arabidopsis thaliana)

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Gene Identifier
AT5G44360
Transcript Identifier
AT5G44360.2
Gene Type
Coding gene
Location
Chr5 : 17872100-17873746 : negative

Family

Gene family
HOM04M000195
(475 genes in 28 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Description
FAD-binding Berberine family protein
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Identifiers

Type Value
tidAT5G44360.2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055114 IEAGene Ontologyoxidation-reduction process1
GO:0009753 IEAPLAZA Integrative Orthologyresponse to jasmonic acidAT4G20860

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003824 IEAInterProcatalytic activity
GO:0050660 IEAGene Ontologyflavin adenine dinucleotide binding1
GO:0016491 IEAInterProoxidoreductase activity
GO:0016614 IEAGene Ontologyoxidoreductase activity, acting on CH-OH group of donors1
GO:0009055 ISSGene Ontologyelectron carrier activity1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005576 IEAGene Ontologyextracellular region1
GO:0005737 ISMGene Ontologycytoplasm1
GO:0009505 IDAGene Ontologyplant-type cell wall1 2
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT4G20860

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR016167FAD-binding, type 2, subdomain 1
IPR016169CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
IPR012951Berberine/berberine-like
IPR006094FAD linked oxidase, N-terminal
IPR006093Oxygen oxidoreductase covalent FAD-binding site
IPR016166FAD-binding, type 2

Mapman id Description
50.1.1.Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor
No SignalP domains detected for this gene.